J Plant Ecol ›› Advance articles     DOI:10.1093/jpe/rtaf109

• Research Article •    

Substrate and microorganism-driven shape seasonal variations in soil denitrification rates along altitudes in alpine mountains

Qiong Chen1, 2, Chunyan Long1, Xiuxian Men1, Kaikui Chang3, Yong Bao1, Xiaoli Cheng1* #br#   

  1. 1Ministry of Education Key Laboratory for Transboundary Ecosecurity of Southwest China, Key Laboratory of Soil Ecology and Health in Universities of Yunnan Province, School of Ecology and Environmental Sciences, Yunnan University, Kunming 650091, China. 
    2Shaanxi Key Laboratory of Qinling Ecological Intelligent Monitoring and Protection, School of Ecology and Environment, Northwestern Polytechnical University, Xi'an 710129, China 
    3Bijie Ecological and Environment Monitoring Center, Bijie 551700, China 


    *Corresponding author. E-mail: xlcheng@ynu.edu.cn 

  • Online:2025-08-05 Published:2025-08-05
  • Supported by:
    This research was financially supported by the National Natural Science Foundation of China (32130069; 32401353), the Key Research and Development Program of Yunnan Province (202303AC100009), the China Postdoctoral Science Foundation (2023M732865), and the Postdoctoral Fellowship Program of CPSF (GZB20230979).

Abstract: Microorganism-mediated nitrogen (N) denitrification and dynamics are crucial ecosystems functions that influence N losses. However, the drivers and microbial mechanisms underlying seasonal variations in denitrification across elevations in alpine forest mountain ecosystems remain poorly understood. Here, we assessed the variations in potential denitrification rates and denitrifier communities using 15N-labeling techniques and high-throughput sequencing, and examined soil properties across an elevational gradient in alpine forest mountains. Our findings demonstrated that soil potential denitrification rates decreased with increasing elevations, exhibiting lower levels during the wet season (0.095 ± 0.005 mg kg-1 d-1) compared to the dry season (0.12 ± 0.007 mg kg-1 d-1) (P < 0.05). Soil substrates, including NH4+-N, dissolved organic nitrogen, and total nitrogen, were identified as pivotal regulators of soil denitrification during the dry season, indicating substrate-driven control. Conversely, microbial attributes (nirS and nosZ genes abundance), were the primary factors governing soil denitrification during the wet season, reflecting microbial regulation. Additionally, Bradyrhizobium emerged as the dominant genus contributing to denitrification rates in our study. Overall, our study underscored the diverse factors driving the seasonal dynamics of soil denitrification and provided critical insights to improve ecosystem models to better predict N losses under increasingly pronounced wet-dry precipitation patterns.

Key words: Forest ecosystem, Nitrogen dynamics, Elevations, Edaphic properties,  , Denitrifying genes