J Plant Ecol ›› 2023, Vol. 16 ›› Issue (6): rtad032.DOI: 10.1093/jpe/rtad032

• Research Article •    

Climatic factors regulate the assembly processes of abundant and rare microbial communities in desert soil

Qiang Sun1,†, Hang-Yu Li1,†, Kuan Li1, Xiao-Qing Zhang2, Ya-Bo Shi3, Yan-Tao Wu1, Xing Li4, Zhi-Yong Li1,*, Jing-Hui Zhang1, Li-Xin Wang1, Cun-Zhu Liang1   

  1. 1Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Collaborative Innovation Center for Grassland Ecological Security, Ministry of Education of China, School of Ecology and Environment, Inner Mongolia University, Hohhot 010021, China;
    2Inner Mongolia M∙Grass Seed Industry Co., Ltd., Hohhot 010010, China;
    3School of Resources and Environment,Baotou Teachers' College, Baotou 014030, China;
    4Inner Mongolia Academy of Forestry Science, Hohhot 010010, China
  • Received:2023-05-22 Revised:2023-06-26 Accepted:2023-09-13 Online:2023-09-28 Published:2023-12-01
  • Contact: E-mail: zylee007@imu.edu.cn
  • About author:†These authors contributed equally to this work.

气候因子调节荒漠土壤中丰富和稀有微生物群落的聚集过程

Abstract: Soil microorganisms, which include many rare taxa and a small number of abundant taxa, have different contributions to the ecosystem functions and services. High throughput sequencing technology was used to analyze the species composition of soil samples by DNA sequencing. Soil microorganisms were divided into abundant taxa and rare taxa to reveal their composition. Correlation analysis and random forest method were used to further analyze the influence of environmental factors on the community. Finally, the beta nearest taxon index (βNTI) based on the null model was used to elucidate the mechanisms underlying soil microbial community assembly. We found that, in desert soil, the community assembly of rare bacteria was almost entirely dominated by a homogeneous selection of deterministic processes. For comparison, stochastic processes had more pronounced effects on the abundant bacteria. However, both abundant and rare fungi exhibited similar patterns of community assembly, i.e. deterministic and stochastic processes jointly determined the assembly processes of fungal communities. We also observed that community assembly shifted from stochastic to deterministic processes with increasing mean annual precipitation (MAP) and mean annual temperature (MAT) for abundant bacteria. Conversely, for rare fungi, there was an inclination toward a shift from deterministic to stochastic processes with rising MAT. In conclusion, our findings provide compelling evidence that MAT and MAP regulate the community assembly process of abundant and rare microbial communities in desert soil. These findings establish a theoretical foundation for future investigations into the community structure and ecological functions of soil microorganisms.

Key words: biogeography, deterministic processes, stochastic processes, abundant taxa and rare taxa, climatic factors

摘要:
土壤微生物由少数的丰富类群和大量的稀有类群组成, 它们对生态系统的功能和服务有不同的贡献。本研究采用高通量测序技术对荒漠土壤样品的物种组成进行DNA测序分析, 揭示土壤微生物丰富类群和稀有类群的组成结构。采用相关性分析和随机森林方法进一步分析环境因子对丰富和稀有类群群落的影响。最后, 利用基于零模型的β-最近类群指数(βNTI)解析土壤微生物的群落构建机制。研究结果表明, 在荒漠土壤中, 稀有细菌的群落构建几乎完全由确定性的同质选择过程支配;相比之下,随机过程对丰富细菌的影响更为明显。然而,无论是丰富真菌还是稀有真菌都表现出相似的群落构建模式,即确定性过程和随机过程共同决定了真菌的群落构建过程。这些结果表明, 随着平均年降水量(MAP)和平均年气温(MAT)的增加,丰富细菌的群落构建过程从随机性转变为确定性。而对稀有真菌来说,随着MAT的增加,群落构建过程从确定性向随机性转变。该研究提供了MAT和MAP调节荒漠土壤中丰富和稀有微生物群落构建过程的明确证据。这些发现为进一步研究土壤微生物群落结构和生态功能奠定了理论基础。

关键词: 生物地理学, 确定性过程, 随机过程, 丰富类群和稀有类群, 气候因素