J Plant Ecol ›› 2019, Vol. 12 ›› Issue (4): 636-644 .DOI: 10.1093/jpe/rty058

• Research Articles • Previous Articles     Next Articles

Examining residual spatial correlation in variation partitioning of beta diversity in a subtropical forest

Ke Cao1,2, Xiangcheng Mi2, Liwen Zhang3, Haibao Ren2, Mingjian Yu4, Jianhua Chen5, Jintun Zhang1,* and Keping Ma2   

  1. 1 Key Laboratory of Biodiversity Sciences and Ecological Engineering, Ministry of Education, College of Life Sciences, Beijing Normal University, Beijing 100875, China
    2 State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, 20 Nanxingcun, Xiangshan, Beijing 100093, China
    3 Key Laboratory of Coastal Zone Environmental Processes, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai 264003, China
    4 College of Life Sciences, Zhejiang University, Hangzhou 310058, China
    5 College of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua 321004, China
    *Correspondence address. College of Life Sciences, Beijing Normal University, Beijing 100875, China. Tel: 010-58807647, Fax: 010-58807721, E-mail: zhangjt@bnu.edu.cn
  • Received:2018-09-11 Revised:2018-11-28 Accepted:2019-01-05 Online:2019-01-07 Published:2019-08-01

Abstract:

Aims

The relative roles of ecological processes in structuring beta diversity are usually quantified by variation partitioning of beta diversity with respect to environmental and spatial variables or gamma diversity. However, if important environmental or spatial factors are omitted, or a scale mismatch occurs in the analysis, unaccounted spatial correlation will appear in the residual errors and lead to residual spatial correlation and problematic inferences.

Methods

Multi-scale ordination (MSO) partitions the canonical ordination results by distance into a set of empirical variograms which characterize the spatial structures of explanatory, conditional and residual variance against distance. Then these variance components can be used to diagnose residual spatial correlation by checking assumptions related to geostatistics or regression analysis. In this paper, we first illustrate the performance of MSO using a simulated data set with known properties, thus making statistical issues explicit. We then test for significant residual spatial correlation in beta diversity analyses of the Gutianshan (GTS) 24-ha subtropical forest plot in eastern China.

Important Findings

Even though we used up to 24 topographic and edaphic variables mapped at high resolution and spatial variables representing spatial structures at all scales, we still found significant residual spatial correlation at the 10 m × 10 m quadrat scale. This invalidated the analysis and inferences at this scale. We also show that MSO provides a complementary tool to test for significant residual spatial correlation in beta diversity analyses. Our results provided a strong argument supporting the need to test for significant residual spatial correlation before interpreting the results of beta diversity analyses.

Key words: beta analysis, residual spatial correlation, spatial scale, canonical ordination, multi-scale ordination, variation partitioning