Journal of Plant Ecology ›› 2025, Vol. 18 ›› Issue (1): 1-19.DOI: 10.1093/jpe/rtae105

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亚热带森林土壤微生物群落以及树木组成与关键微生物的关系强于与稀有微生物的关系

  

  • 收稿日期:2024-06-03 接受日期:2024-11-06 出版日期:2025-02-01 发布日期:2025-03-20

Structure and functions of soil microbial communities and tree composition are more closely associated with keystone microbes than rare microbes in a subtropical forest

Xian Wu1, David C. Deane2, Hua Xing1, Jiarong Yang1, Junfang Chen1, Xiaolin Liu1, Shu Dong1, Fangliang He1,3 and Yu Liu1,4,*   

  1. 1ECNU-Alberta Joint Lab for Biodiversity Study, Tiantong Forest Ecosystem National Observation and Research Station, School of Ecology and Environmental Sciences, East China Normal University, Shanghai 200241, China,
    2Research Centre for Future Landscapes and School of Environment and Genetics, La Trobe University, Bundoora, VIC 3083, Australia,
    3Department of Renewable Resources, University of Alberta, Edmonton, Alberta T6G 11 2H1, Canada,
    4Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200241, China

    *Corresponding author. E-mail: yuliu@des.ecnu.edu.cn
  • Received:2024-06-03 Accepted:2024-11-06 Online:2025-02-01 Published:2025-03-20
  • Supported by:
    The work was supported by the National Natural Science Foundation of China 470 (32071645 and 32471613), the Research Project of Baishanzu National Park (2022JBGS04 and 2023JBGS06), the Fundamental Research Funds for the Central Universities of China and the Natural Sciences and Engineering Research Council of Canada.

摘要: 微生物在参与碳氮循环和能量流动以及分解有机物质等方面对生态系统功能具有重要作用。然而,在单一生态系统中,关键类群和稀有类群对土壤微生物功能的相对贡献尚未得到充分量化。此外,它们对非生物因素的共同或独特响应缺乏深入研究,并且它们与森林生态系统中树木群落组成的关联尚不明确。因此,本研究依托浙江天童20公顷亚热带森林动态监测样地,采集了1287份土壤样本,并进行了高通量测序分析以明确微生物群落组成。基于共现网络分析,我们比较了微生物关键类群和稀有类群与土壤微生物群落结构、功能和稳定性间的关系。此外,我们还探究了它们与树木群落组成之间的关系。结果显示,在所有微生物功能和稳定性的比较中,微生物关键类群的贡献程度均高于稀有类群。关键类群对微生物群落结构产生了直接影响,并在一定程度上调节了非生物因素的间接作用。然而,稀有类群并未表现出类似的影响。此外,关键类群的重要性同样体现在地上树木群落的组成上,即树木群落组成与关键类群的关系明显强于与稀有类群的关系。上述研究结果表明,通过对少数关键土壤微生物类群的调控,有望提升森林生态系统的功能及树木多样性。

关键词: 群落稳定性, 生态网络, 生态系统功能, 关键类群, 稀有类群

Abstract: The significance of microbes for ecosystem functioning is well known; however, within a single system, the relative contributions of keystone and rare taxa to soil microbial functions are less well quantified, as are their shared or unique responses to abiotic conditions. Furthermore, their associations with tree community composition in natural forest ecosystems are not well understood. In this study, a total of 1287 soil samples were collected from a 20-ha subtropical forest plot and analyzed using high-throughput sequencing. Based on co-occurrence network analyses, we conducted a comparison of the associations between keystone and rare taxa with the structure, functions and stability of soil microbial communities. Additionally, we examined their associations with tree community composition. Results showed that keystone taxa made a significantly greater contribution than rare taxa in all comparisons of microbial functions and stability. Keystone taxa had direct effects on microbial community structure and also mediated indirect effects of abiotic conditions. Neither effect was evident for rare taxa. The importance of keystone taxa also extended to aboveground composition, where tree community composition was more closely associated with keystone taxa than with rare taxa. While it may still be premature to establish causality, our study represents one of the initial attempts to compare the relative importance of keystone and rare microbial taxa in forest soils. These findings offer the potential to improve natural forest ecosystem functioning and tree diversity through the manipulation of a small number of keystone soil microbial taxa, as has been demonstrated in agroecosystems.

Key words: community stability, ecological network, ecosystem functioning, keystone taxa, rare taxa